Goose only used yards and TD's. QB's who rack up overall nice totals but blow in efficiency stats tend to be discredited. Eli's no more held to a higher standard than Drew Bledsoe or Vinny Testeverde are because they're never recognized as Top 10 All Time QB's even though they rank among the all time highest in total yards and TD's.
Just like there seems to be a butting of heads between statisticians and traditional baseball people on the relevency of a category like "wins" for a pitcher, I see the same thing coming for "TD's" by a QB. I, myself, think its a relatively meaningless stat because no two TD's are the same. If a QB zips a 15 yard post to a WR between 2 defenders .. absolutely he should be credited with a TD stat. When a team drives down the length of the field running the ball down the defense's throats, and then the QB completes a 4 yard pass in the back of the endzone to a wide open TE on a play action pass because the defense expects/fears the run ... I don't necessarily think the QB should be accredited as being responsible for the 6 points. Or if Donovan McNabb throws a simple, run of the mill, 5 yard slant to Terrell Owens and TO breaks 3 tackles, jukes out another defender and takes it 70 yards to the house, how much was McNabb responsible for the TD? In fact, a QB can often times be credited with a TD on a poor play, such as just throwing the ball up in the air for grabs deep.
If a QB A throws a key 15 yard completion on a 3rd down and 9 on the 40 yard line between three defenders that keeps a scoring drive alive that's later punched in by his RB and QB B completes an 8 yard fade to the back of the endzone where the WR has to do 90% of the work to outjump the cornerback to come down with the catch ... I thnk QB A was more pivitol to his team scoring a touchdown, even though he wasn't credited with a TD.